Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6990-201ENSMUST00000086830 348 ntBASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim9Q8C7M3 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Mir700-201ENSMUST00000102169 79 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Mir669o-201ENSMUST00000103898 96 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm26144-201ENSMUST00000104475 132 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm16007-201ENSMUST00000117837 286 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm15400-201ENSMUST00000118944 601 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Vis1-201ENSMUST00000183957 201 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm19124-201ENSMUST00000191041 832 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37430-201ENSMUST00000193039 196 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37599-201ENSMUST00000193067 489 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37716-201ENSMUST00000193553 947 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm44312-201ENSMUST00000203536 469 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm45082-201ENSMUST00000206082 601 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm7443-201ENSMUST00000206355 378 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm23737-201ENSMUST00000082547 159 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim9Q8C7M3 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Trim9Q8C7M3 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms