Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a2P25318 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC4.75□□□□□ -1.65
Col8a2P25318 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a2P25318 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a2P25318 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a2P25318 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.75□□□□□ -1.65
Col8a2P25318 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a2P25318 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col8a2P25318 Gm16523-202ENSMUST00000203640 4750 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 AC131687.1-201ENSMUST00000225931 5446 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm4989-201ENSMUST00000118711 749 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm11227-201ENSMUST00000119774 471 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm13533-201ENSMUST00000121104 177 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm13593-201ENSMUST00000121329 692 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm5401-201ENSMUST00000122444 365 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm26172-201ENSMUST00000158421 134 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a2P25318 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm38181-201ENSMUST00000181357 720 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm5244-202ENSMUST00000189517 743 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm7733-201ENSMUST00000199038 919 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm42652-201ENSMUST00000199073 614 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm6520-201ENSMUST00000200636 410 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm18705-201ENSMUST00000215985 913 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.74□□□□□ -1.65
Col8a2P25318 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm9269-201ENSMUST00000221661 578 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Col8a2P25318 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Col8a2P25318 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.74□□□□□ -1.65
Col8a2P25318 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a2P25318 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a2P25318 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a2P25318 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col8a2P25318 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.73□□□□□ -1.65
Col8a2P25318 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Col8a2P25318 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col8a2P25318 Gm43611-201ENSMUST00000196656 4352 ntBASIC4.73□□□□□ -1.65
Col8a2P25318 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms