Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Gm24374-201ENSMUST00000104394 106 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Gm24160-201ENSMUST00000104594 126 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Gm13438-201ENSMUST00000120100 573 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Gm5392-201ENSMUST00000122189 789 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC7.93□□□□□ -1.14
Col18a1P39061 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC7.93□□□□□ -1.14
Col18a1P39061 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.93□□□□□ -1.14
Col18a1P39061 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col18a1P39061 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col18a1P39061 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.93□□□□□ -1.14
Col18a1P39061 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col18a1P39061 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.93□□□□□ -1.14
Col18a1P39061 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm12583-201ENSMUST00000120677 853 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm25389-201ENSMUST00000157340 286 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm44539-201ENSMUST00000206010 238 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm6125-201ENSMUST00000217983 3472 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 n-R5s24-201ENSMUST00000122518 117 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm10319-202ENSMUST00000159439 846 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm17907-201ENSMUST00000173150 710 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm26950-201ENSMUST00000182734 498 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm31123-201ENSMUST00000192094 666 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm18529-201ENSMUST00000193025 1257 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm37490-201ENSMUST00000195566 724 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Rnu3a-202ENSMUST00000196710 213 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm7333-201ENSMUST00000213449 1060 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC7.92□□□□□ -1.14
Col18a1P39061 AC109214.2-201ENSMUST00000220089 358 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Col18a1P39061 Rnu3a-201ENSMUST00000083936 214 ntBASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC7.92□□□□□ -1.14
Col18a1P39061 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col18a1P39061 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col18a1P39061 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms