Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Gm13534-201ENSMUST00000121169 513 ntBASIC16.27■□□□□ 0.2
H2afb1S4R1E0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Gm42778-201ENSMUST00000199644 553 ntBASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
H2afb1S4R1E0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2afb1S4R1E0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2afb1S4R1E0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2afb1S4R1E0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
H2afb1S4R1E0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H2afb1S4R1E0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms