Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1h3Q9Z0Y9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nr1h3Q9Z0Y9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr1h3Q9Z0Y9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm43799-201ENSMUST00000201845 579 ntBASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm21814-202ENSMUST00000203277 873 ntBASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nr1h3Q9Z0Y9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm30025-201ENSMUST00000218555 728 ntBASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr1h3Q9Z0Y9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm12382-201ENSMUST00000122005 922 ntBASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr1h3Q9Z0Y9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr1h3Q9Z0Y9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms