Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msh5Q9QUM7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh5Q9QUM7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Msh5Q9QUM7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Msh5Q9QUM7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh5Q9QUM7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh5Q9QUM7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh5Q9QUM7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh5Q9QUM7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh5Q9QUM7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh5Q9QUM7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms