Protein–RNA interactions for Protein: Q99MJ6

Pdzd3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, mousemouse

Predictions only

Length 498 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd3Q99MJ6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdzd3Q99MJ6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Gm17808-201ENSMUST00000200859 894 ntBASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdzd3Q99MJ6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Gm34391-201ENSMUST00000203706 907 ntBASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdzd3Q99MJ6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdzd3Q99MJ6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdzd3Q99MJ6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Pdzd3Q99MJ6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Pdzd3Q99MJ6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pdzd3Q99MJ6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Gm18206-201ENSMUST00000207027 926 ntBASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdzd3Q99MJ6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Gm13884-201ENSMUST00000118103 829 ntBASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdzd3Q99MJ6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms