Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 CYP2T1P-201ENST00000432607 1285 ntBASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTHRC1Q96CG8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 AC026185.1-201ENST00000445748 174 ntBASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 AC100791.3-201ENST00000617619 330 ntBASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 FP700111.2-201ENST00000619190 1892 ntBASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTHRC1Q96CG8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 AC090192.1-201ENST00000517740 490 ntBASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 AC005181.1-201ENST00000604782 1256 ntBASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CTHRC1Q96CG8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 AL121603.2-201ENST00000557373 2117 ntBASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 AC069236.1-201ENST00000604339 616 ntBASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 OR10C1-204ENST00000622521 1039 ntBASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 CYP21A1P-202ENST00000354927 1481 ntBASIC19.09■□□□□ 0.65
CTHRC1Q96CG8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CTHRC1Q96CG8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 AL512625.2-201ENST00000417533 625 ntBASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 AC133552.2-202ENST00000575694 574 ntBASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTHRC1Q96CG8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTHRC1Q96CG8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms