Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF248Q8NDW4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 SOX15-203ENST00000570788 1093 ntBASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF248Q8NDW4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF248Q8NDW4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF248Q8NDW4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ZNF248Q8NDW4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AC012618.2-201ENST00000428058 849 ntBASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF248Q8NDW4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 AC233263.1-201ENST00000578059 224 ntBASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF248Q8NDW4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 EP400NL-214ENST00000641289 2402 ntBASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF248Q8NDW4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 AC245052.3-201ENST00000450182 901 ntBASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms