Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nop53Q8BK35 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.23■□□□□ 0.67
Nop53Q8BK35 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nop53Q8BK35 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nop53Q8BK35 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nop53Q8BK35 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.21■□□□□ 0.67
Nop53Q8BK35 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nop53Q8BK35 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Nop53Q8BK35 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nop53Q8BK35 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nop53Q8BK35 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nop53Q8BK35 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nop53Q8BK35 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nop53Q8BK35 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.16■□□□□ 0.66
Nop53Q8BK35 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms