Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scube1Q6NZL8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scube1Q6NZL8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Gm40848-201ENSMUST00000221998 324 ntBASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scube1Q6NZL8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scube1Q6NZL8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scube1Q6NZL8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Smad6-203ENSMUST00000179458 273 ntBASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Gm43060-201ENSMUST00000200621 289 ntBASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scube1Q6NZL8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms