Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt39Q6IFX4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.83■□□□□ 0.77
Krt39Q6IFX4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt39Q6IFX4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.83■□□□□ 0.76
Krt39Q6IFX4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Gm22325-201ENSMUST00000158904 308 ntBASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt39Q6IFX4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt39Q6IFX4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt39Q6IFX4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt39Q6IFX4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt39Q6IFX4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Gm8969-201ENSMUST00000199694 526 ntBASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Gm42569-201ENSMUST00000200539 472 ntBASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.77■□□□□ 0.76
Krt39Q6IFX4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms