Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ift88Q61371 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ift88Q61371 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ift88Q61371 Gm6420-201ENSMUST00000193885 723 ntBASIC19.86■□□□□ 0.77
Ift88Q61371 Gm42778-201ENSMUST00000199644 553 ntBASIC19.86■□□□□ 0.77
Ift88Q61371 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ift88Q61371 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.85■□□□□ 0.77
Ift88Q61371 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ift88Q61371 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ift88Q61371 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Ift88Q61371 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ift88Q61371 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ift88Q61371 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ift88Q61371 Nespas-201ENSMUST00000143738 1083 ntBASIC19.84■□□□□ 0.77
Ift88Q61371 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Ift88Q61371 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ift88Q61371 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ift88Q61371 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ift88Q61371 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ift88Q61371 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ift88Q61371 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ift88Q61371 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ift88Q61371 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.83■□□□□ 0.76
Ift88Q61371 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ift88Q61371 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ift88Q61371 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ift88Q61371 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ift88Q61371 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.81■□□□□ 0.76
Ift88Q61371 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.81■□□□□ 0.76
Ift88Q61371 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.81■□□□□ 0.76
Ift88Q61371 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ift88Q61371 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.81■□□□□ 0.76
Ift88Q61371 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ift88Q61371 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ift88Q61371 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.8■□□□□ 0.76
Ift88Q61371 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.8■□□□□ 0.76
Ift88Q61371 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.8■□□□□ 0.76
Ift88Q61371 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.8■□□□□ 0.76
Ift88Q61371 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.8■□□□□ 0.76
Ift88Q61371 Gm10493-201ENSMUST00000097270 612 ntBASIC19.8■□□□□ 0.76
Ift88Q61371 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ift88Q61371 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms