Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav3-3Q5R1C3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav3-3Q5R1C3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav3-3Q5R1C3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Etf1-202ENSMUST00000180351 108 ntBASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Gm15820-201ENSMUST00000201566 728 ntBASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav3-3Q5R1C3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav3-3Q5R1C3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms