Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab4aP56371 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rab4aP56371 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rab4aP56371 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab4aP56371 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rab4aP56371 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab4aP56371 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab4aP56371 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab4aP56371 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab4aP56371 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.19□□□□□ -0.14
Rab4aP56371 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.19□□□□□ -0.14
Rab4aP56371 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.19□□□□□ -0.14
Rab4aP56371 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab4aP56371 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.19□□□□□ -0.14
Rab4aP56371 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab4aP56371 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Rab4aP56371 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab4aP56371 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Rab4aP56371 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab4aP56371 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab4aP56371 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab4aP56371 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Rab4aP56371 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.17□□□□□ -0.14
Rab4aP56371 Gm10399-202ENSMUST00000202768 748 ntBASIC14.17□□□□□ -0.14
Rab4aP56371 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab4aP56371 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.17□□□□□ -0.14
Rab4aP56371 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab4aP56371 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.16□□□□□ -0.14
Rab4aP56371 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab4aP56371 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab4aP56371 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab4aP56371 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab4aP56371 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab4aP56371 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab4aP56371 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms