Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 ACM1YPL267W 630 nt2.58□□□□□ -2
LSM5P40089 TAZ1YPR140W 1146 nt2.58□□□□□ -2
LSM5P40089 YLR001CYLR001C 2589 nt2.58□□□□□ -2
LSM5P40089 GAL80YML051W 1308 nt2.58□□□□□ -2
LSM5P40089 PES4YFR023W 1836 nt2.57□□□□□ -2
LSM5P40089 IRC2YDR112W 309 nt2.57□□□□□ -2
LSM5P40089 YDR250CYDR250C 276 nt2.57□□□□□ -2
LSM5P40089 NCB2YDR397C 441 nt2.57□□□□□ -2
LSM5P40089 TMA20YER007C-A 546 nt2.57□□□□□ -2
LSM5P40089 YER119C-AYER119C-A 372 nt2.57□□□□□ -2
LSM5P40089 YIL174WYIL174W 228 nt2.57□□□□□ -2
LSM5P40089 YJL119CYJL119C 324 nt2.57□□□□□ -2
LSM5P40089 YJL222W-AYJL222W-A 228 nt2.57□□□□□ -2
LSM5P40089 RCE1YMR274C 948 nt2.57□□□□□ -2
LSM5P40089 YOR364WYOR364W 369 nt2.57□□□□□ -2
LSM5P40089 ARR2YPR200C 393 nt2.57□□□□□ -2
LSM5P40089 HSC82YMR186W 2118 nt2.57□□□□□ -2
LSM5P40089 YDR239CYDR239C 2364 nt2.57□□□□□ -2
LSM5P40089 ROY1YMR258C 1662 nt2.57□□□□□ -2
LSM5P40089 AXL1YPR122W 3627 nt2.56□□□□□ -2
LSM5P40089 PRP6YBR055C 2700 nt2.56□□□□□ -2
LSM5P40089 YNL034WYNL034W 1839 nt2.56□□□□□ -2
LSM5P40089 YDR018CYDR018C 1191 nt2.56□□□□□ -2
LSM5P40089 YHR086W-AYHR086W-A 162 nt2.56□□□□□ -2
LSM5P40089 AIM18YHR198C 966 nt2.56□□□□□ -2
LSM5P40089 YKL066WYKL066W 444 nt2.56□□□□□ -2
LSM5P40089 IGO1YNL157W 507 nt2.56□□□□□ -2
LSM5P40089 YNL179CYNL179C 438 nt2.56□□□□□ -2
LSM5P40089 YNR021WYNR021W 1215 nt2.56□□□□□ -2
LSM5P40089 TRM7YBR061C 933 nt2.56□□□□□ -2
LSM5P40089 MUD1YBR119W 897 nt2.56□□□□□ -2
LSM5P40089 KRE33YNL132W 3171 nt2.56□□□□□ -2
LSM5P40089 MSB2YGR014W 3921 nt2.56□□□□□ -2
LSM5P40089 INP53YOR109W 3324 nt2.55□□□□□ -2
LSM5P40089 YDL009CYDL009C 324 nt2.55□□□□□ -2
LSM5P40089 VMA21YGR105W 234 nt2.55□□□□□ -2
LSM5P40089 LRP1YHR081W 555 nt2.55□□□□□ -2
LSM5P40089 INP51YIL002C 2841 nt2.55□□□□□ -2
LSM5P40089 DFG10YIL049W 762 nt2.55□□□□□ -2
LSM5P40089 CSE4YKL049C 690 nt2.55□□□□□ -2
LSM5P40089 PSO2YMR137C 1986 nt2.55□□□□□ -2
LSM5P40089 HHT2YNL031C 411 nt2.55□□□□□ -2
LSM5P40089 FLO11YIR019C 4104 nt2.55□□□□□ -2
LSM5P40089 YPP1YGR198W 2454 nt2.54□□□□□ -2
LSM5P40089 GIS1YDR096W 2685 nt2.54□□□□□ -2
LSM5P40089 YCR108CYCR108C 192 nt2.54□□□□□ -2
LSM5P40089 TSA2YDR453C 591 nt2.54□□□□□ -2
LSM5P40089 ACB1YGR037C 264 nt2.54□□□□□ -2
LSM5P40089 SLX9YGR081C 633 nt2.54□□□□□ -2
LSM5P40089 RPS22AYJL190C 393 nt2.54□□□□□ -2
LSM5P40089 YKL023C-AYKL023C-A 228 nt2.54□□□□□ -2
LSM5P40089 MPP6YNR024W 561 nt2.54□□□□□ -2
LSM5P40089 YPR147CYPR147C 915 nt2.54□□□□□ -2
LSM5P40089 VPS16YPL045W 2397 nt2.54□□□□□ -2
LSM5P40089 ECM25YJL201W 1800 nt2.54□□□□□ -2
LSM5P40089 TOR1YJR066W 7413 nt2.53□□□□□ -2
LSM5P40089 SAP1YER047C 2694 nt2.53□□□□□ -2
LSM5P40089 YCR081C-AYCR081C-A 237 nt2.53□□□□□ -2
LSM5P40089 YDR209CYDR209C 414 nt2.53□□□□□ -2
LSM5P40089 TWF1YGR080W 999 nt2.53□□□□□ -2
LSM5P40089 YJR087WYJR087W 351 nt2.53□□□□□ -2
LSM5P40089 YLR302CYLR302C 363 nt2.53□□□□□ -2
LSM5P40089 YMR320WYMR320W 306 nt2.53□□□□□ -2
LSM5P40089 YEL043WYEL043W 2871 nt2.53□□□□□ -2
LSM5P40089 YDR186CYDR186C 2634 nt2.52□□□□□ -2.01
LSM5P40089 KIN82YCR091W 2163 nt2.52□□□□□ -2.01
LSM5P40089 GPI8YDR331W 1236 nt2.52□□□□□ -2.01
LSM5P40089 SDC1YDR469W 528 nt2.52□□□□□ -2.01
LSM5P40089 YHR032W-AYHR032W-A 180 nt2.52□□□□□ -2.01
LSM5P40089 SWR1YDR334W 4545 nt2.52□□□□□ -2.01
LSM5P40089 ESC1YMR219W 4977 nt2.51□□□□□ -2.01
LSM5P40089 NUP100YKL068W 2880 nt2.51□□□□□ -2.01
LSM5P40089 RPL29YFR032C-A 180 nt2.51□□□□□ -2.01
LSM5P40089 YGL042CYGL042C 306 nt2.51□□□□□ -2.01
LSM5P40089 RAD6YGL058W 519 nt2.51□□□□□ -2.01
LSM5P40089 NEW1YPL226W 3591 nt2.51□□□□□ -2.01
LSM5P40089 SSE1YPL106C 2082 nt2.51□□□□□ -2.01
LSM5P40089 NAB6YML117W 3405 nt2.51□□□□□ -2.01
LSM5P40089 RRP12YPL012W 3687 nt2.5□□□□□ -2.01
LSM5P40089 TRS130YMR218C 3309 nt2.5□□□□□ -2.01
LSM5P40089 YPL216WYPL216W 3309 nt2.5□□□□□ -2.01
LSM5P40089 AFR1YDR085C 1863 nt2.5□□□□□ -2.01
LSM5P40089 RPL14BYHL001W 417 nt2.5□□□□□ -2.01
LSM5P40089 PRS3YHL011C 963 nt2.5□□□□□ -2.01
LSM5P40089 RIO2YNL207W 1278 nt2.5□□□□□ -2.01
LSM5P40089 RPL25YOL127W 429 nt2.5□□□□□ -2.01
LSM5P40089 SRL4YPL033C 846 nt2.5□□□□□ -2.01
LSM5P40089 PHO2YDL106C 1680 nt2.5□□□□□ -2.01
LSM5P40089 SRB8YCR081W 4284 nt2.5□□□□□ -2.01
LSM5P40089 HAA1YPR008W 2085 nt2.49□□□□□ -2.01
LSM5P40089 SSF1YHR066W 1362 nt2.49□□□□□ -2.01
LSM5P40089 STD1YOR047C 1335 nt2.49□□□□□ -2.01
LSM5P40089 BUB1YGR188C 3066 nt2.49□□□□□ -2.01
LSM5P40089 VPS51YKR020W 495 nt2.49□□□□□ -2.01
LSM5P40089 RGL1YPL066W 1440 nt2.49□□□□□ -2.01
LSM5P40089 BCK1YJL095W 4437 nt2.49□□□□□ -2.01
LSM5P40089 DNA2YHR164C 4569 nt2.49□□□□□ -2.01
LSM5P40089 NDD1YOR372C 1665 nt2.48□□□□□ -2.01
LSM5P40089 CHZ1YER030W 462 nt2.48□□□□□ -2.01
LSM5P40089 IST3YIR005W 447 nt2.48□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms