Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.34■□□□□ 0.21
TpbpaP13438 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TpbpaP13438 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.34■□□□□ 0.21
TpbpaP13438 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TpbpaP13438 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TpbpaP13438 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TpbpaP13438 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TpbpaP13438 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TpbpaP13438 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TpbpaP13438 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.33■□□□□ 0.2
TpbpaP13438 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.33■□□□□ 0.2
TpbpaP13438 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.33■□□□□ 0.2
TpbpaP13438 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TpbpaP13438 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TpbpaP13438 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.32■□□□□ 0.2
TpbpaP13438 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Gm43060-201ENSMUST00000200621 289 ntBASIC16.32■□□□□ 0.2
TpbpaP13438 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TpbpaP13438 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpaP13438 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
TpbpaP13438 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TpbpaP13438 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TpbpaP13438 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.31■□□□□ 0.2
TpbpaP13438 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TpbpaP13438 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.31■□□□□ 0.2
TpbpaP13438 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpaP13438 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TpbpaP13438 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Fst-202ENSMUST00000223640 2612 ntBASIC16.3■□□□□ 0.2
TpbpaP13438 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpaP13438 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.29■□□□□ 0.2
TpbpaP13438 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.29■□□□□ 0.2
TpbpaP13438 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.29■□□□□ 0.2
TpbpaP13438 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.29■□□□□ 0.2
TpbpaP13438 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TpbpaP13438 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpaP13438 Gm9988-201ENSMUST00000069786 435 ntBASIC16.29■□□□□ 0.2
TpbpaP13438 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms