Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ApoeP08226 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ApoeP08226 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.99■□□□□ 0.31
ApoeP08226 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ApoeP08226 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ApoeP08226 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.98■□□□□ 0.31
ApoeP08226 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.98■□□□□ 0.31
ApoeP08226 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.98■□□□□ 0.31
ApoeP08226 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
ApoeP08226 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.98■□□□□ 0.31
ApoeP08226 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ApoeP08226 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ApoeP08226 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.97■□□□□ 0.31
ApoeP08226 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ApoeP08226 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.97■□□□□ 0.31
ApoeP08226 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.97■□□□□ 0.31
ApoeP08226 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ApoeP08226 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ApoeP08226 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.96■□□□□ 0.31
ApoeP08226 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.96■□□□□ 0.31
ApoeP08226 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ApoeP08226 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.96■□□□□ 0.31
ApoeP08226 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ApoeP08226 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ApoeP08226 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ApoeP08226 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.96■□□□□ 0.3
ApoeP08226 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ApoeP08226 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ApoeP08226 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.95■□□□□ 0.3
ApoeP08226 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.95■□□□□ 0.3
ApoeP08226 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.95■□□□□ 0.3
ApoeP08226 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.95■□□□□ 0.3
ApoeP08226 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ApoeP08226 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.95■□□□□ 0.3
ApoeP08226 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ApoeP08226 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ApoeP08226 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms