Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cd74P04441 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cd74P04441 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cd74P04441 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cd74P04441 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cd74P04441 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cd74P04441 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cd74P04441 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cd74P04441 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cd74P04441 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.05■□□□□ -0
Cd74P04441 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cd74P04441 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cd74P04441 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cd74P04441 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.04■□□□□ -0
Cd74P04441 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.04■□□□□ -0
Cd74P04441 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cd74P04441 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Gm8520-201ENSMUST00000186517 868 ntBASIC15.04■□□□□ -0
Cd74P04441 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cd74P04441 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cd74P04441 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cd74P04441 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Cd74P04441 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.03■□□□□ -0
Cd74P04441 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cd74P04441 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.03■□□□□ -0
Cd74P04441 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cd74P04441 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd74P04441 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cd74P04441 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cd74P04441 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cd74P04441 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cd74P04441 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cd74P04441 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cd74P04441 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cd74P04441 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.02■□□□□ -0
Cd74P04441 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd74P04441 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Cd74P04441 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd74P04441 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cd74P04441 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.02□□□□□ -0.01
Cd74P04441 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cd74P04441 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cd74P04441 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd74P04441 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd74P04441 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cd74P04441 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd74P04441 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cd74P04441 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd74P04441 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd74P04441 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd74P04441 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.01□□□□□ -0.01
Cd74P04441 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms