Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc28a2O88627 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc28a2O88627 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Slc28a2O88627 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc28a2O88627 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc28a2O88627 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Slc28a2O88627 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Slc28a2O88627 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Slc28a2O88627 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Slc28a2O88627 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.97■□□□□ 0.15
Slc28a2O88627 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Gm18671-201ENSMUST00000214826 683 ntBASIC15.97■□□□□ 0.15
Slc28a2O88627 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Slc28a2O88627 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Slc28a2O88627 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Slc28a2O88627 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Slc28a2O88627 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Slc28a2O88627 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Slc28a2O88627 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
Slc28a2O88627 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Slc28a2O88627 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Slc28a2O88627 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Slc28a2O88627 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Slc28a2O88627 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.93■□□□□ 0.14
Slc28a2O88627 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Gm13534-201ENSMUST00000121169 513 ntBASIC15.93■□□□□ 0.14
Slc28a2O88627 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Gm42642-201ENSMUST00000200683 355 ntBASIC15.93■□□□□ 0.14
Slc28a2O88627 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.93■□□□□ 0.14
Slc28a2O88627 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc28a2O88627 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc28a2O88627 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc28a2O88627 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms