Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CrxO54751 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CrxO54751 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CrxO54751 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CrxO54751 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CrxO54751 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CrxO54751 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.17□□□□□ -0.3
CrxO54751 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.17□□□□□ -0.3
CrxO54751 Gm8969-201ENSMUST00000199694 526 ntBASIC13.17□□□□□ -0.3
CrxO54751 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CrxO54751 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CrxO54751 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CrxO54751 Gm5921-201ENSMUST00000075898 882 ntBASIC13.16□□□□□ -0.3
CrxO54751 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CrxO54751 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CrxO54751 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.15□□□□□ -0.3
CrxO54751 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.15□□□□□ -0.3
CrxO54751 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CrxO54751 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CrxO54751 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CrxO54751 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.15□□□□□ -0.3
CrxO54751 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.15□□□□□ -0.3
CrxO54751 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CrxO54751 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CrxO54751 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CrxO54751 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CrxO54751 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.14□□□□□ -0.31
CrxO54751 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Mir6236-201ENSMUST00000184437 123 ntBASIC13.14□□□□□ -0.31
CrxO54751 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CrxO54751 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CrxO54751 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CrxO54751 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.13□□□□□ -0.31
CrxO54751 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CrxO54751 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CrxO54751 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CrxO54751 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CrxO54751 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms