Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Hps1O08983 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Hps1O08983 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Hps1O08983 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hps1O08983 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.63■□□□□ 0.25
Hps1O08983 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Hps1O08983 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hps1O08983 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
Hps1O08983 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hps1O08983 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.62■□□□□ 0.25
Hps1O08983 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.62■□□□□ 0.25
Hps1O08983 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.62■□□□□ 0.25
Hps1O08983 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hps1O08983 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Hps1O08983 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hps1O08983 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hps1O08983 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Hps1O08983 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hps1O08983 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hps1O08983 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hps1O08983 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hps1O08983 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.6■□□□□ 0.25
Hps1O08983 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hps1O08983 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hps1O08983 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hps1O08983 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Hps1O08983 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.59■□□□□ 0.25
Hps1O08983 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.59■□□□□ 0.25
Hps1O08983 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.59■□□□□ 0.25
Hps1O08983 Gm13234-201ENSMUST00000120010 747 ntBASIC16.59■□□□□ 0.25
Hps1O08983 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hps1O08983 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hps1O08983 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.59■□□□□ 0.25
Hps1O08983 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.58■□□□□ 0.25
Hps1O08983 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
Hps1O08983 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps1O08983 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps1O08983 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Hps1O08983 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hps1O08983 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hps1O08983 Gm12441-201ENSMUST00000121806 588 ntBASIC16.58■□□□□ 0.24
Hps1O08983 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.58■□□□□ 0.24
Hps1O08983 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hps1O08983 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms