Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5580A0A0N4SVP8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5580A0A0N4SVP8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5580A0A0N4SVP8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5580A0A0N4SVP8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5580A0A0N4SVP8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5580A0A0N4SVP8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Gm8969-201ENSMUST00000199694 526 ntBASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5580A0A0N4SVP8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5580A0A0N4SVP8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5580A0A0N4SVP8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5580A0A0N4SVP8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm5580A0A0N4SVP8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm5874-201ENSMUST00000096101 508 ntBASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm5580A0A0N4SVP8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm10493-201ENSMUST00000097270 612 ntBASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5580A0A0N4SVP8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5580A0A0N4SVP8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms