Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-2A0A0G2JF93 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13n-2A0A0G2JF93 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13n-2A0A0G2JF93 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-2A0A0G2JF93 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13n-2A0A0G2JF93 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13n-2A0A0G2JF93 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13n-2A0A0G2JF93 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13n-2A0A0G2JF93 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Gm45906-201ENSMUST00000208911 1430 ntBASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13n-2A0A0G2JF93 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms