Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BC053393A0A0B4J1F6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BC053393A0A0B4J1F6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BC053393A0A0B4J1F6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BC053393A0A0B4J1F6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
BC053393A0A0B4J1F6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms