Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Spcs1-204ENSMUST00000226782 949 ntBASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv3A0A0A6YYE2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv3A0A0A6YYE2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv3A0A0A6YYE2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Gm15820-201ENSMUST00000201566 728 ntBASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv3A0A0A6YYE2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms