Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv23A0A0A6YWQ1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv23A0A0A6YWQ1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Gm15039-201ENSMUST00000118914 875 ntBASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv23A0A0A6YWQ1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms