Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Gm11421-201ENSMUST00000122124 294 ntBASIC13.88□□□□□ -0.19
Trav16A0A075B653 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav16A0A075B653 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.86□□□□□ -0.19
Trav16A0A075B653 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Gm27801-201ENSMUST00000184174 223 ntBASIC13.86□□□□□ -0.19
Trav16A0A075B653 Gm43137-201ENSMUST00000198052 594 ntBASIC13.86□□□□□ -0.19
Trav16A0A075B653 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.86□□□□□ -0.19
Trav16A0A075B653 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav16A0A075B653 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav16A0A075B653 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms