Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Gm42642-201ENSMUST00000200683 355 ntBASIC15□□□□□ -0.01
Trav5-4A0A075B652 Gm7514-201ENSMUST00000209475 934 ntBASIC15□□□□□ -0.01
Trav5-4A0A075B652 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15□□□□□ -0.01
Trav5-4A0A075B652 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Gm5874-201ENSMUST00000096101 508 ntBASIC15□□□□□ -0.01
Trav5-4A0A075B652 Gm38308-201ENSMUST00000194934 1809 ntBASIC15□□□□□ -0.01
Trav5-4A0A075B652 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav5-4A0A075B652 Fst-202ENSMUST00000223640 2612 ntBASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-4A0A075B652 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Gm10033-202ENSMUST00000211874 928 ntBASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-4A0A075B652 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav5-4A0A075B652 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5-4A0A075B652 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5-4A0A075B652 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5-4A0A075B652 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Trav5-4A0A075B652 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms