Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8-1A0A075B641 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trav8-1A0A075B641 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8-1A0A075B641 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.9□□□□□ -0.35
Trav8-1A0A075B641 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8-1A0A075B641 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Etf1-202ENSMUST00000180351 108 ntBASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Gm9870-201ENSMUST00000063874 645 ntBASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8-1A0A075B641 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav8-1A0A075B641 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.87□□□□□ -0.35
Trav8-1A0A075B641 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.86□□□□□ -0.35
Trav8-1A0A075B641 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms