Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7n-4A0A075B620 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7n-4A0A075B620 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trav7n-4A0A075B620 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav7n-4A0A075B620 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7n-4A0A075B620 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7n-4A0A075B620 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav7n-4A0A075B620 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav7n-4A0A075B620 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav7n-4A0A075B620 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms