Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm12057-201ENSMUST00000117244 1427 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm9877-201ENSMUST00000064271 2627 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm43162-201ENSMUST00000198292 1770 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm15933-201ENSMUST00000117215 616 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm14352-201ENSMUST00000119250 449 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm25843-201ENSMUST00000122582 314 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC8.07□□□□□ -1.12
Col18a1P39061 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm45636-201ENSMUST00000210497 1064 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm45240-201ENSMUST00000211437 674 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 AC133076.2-201ENSMUST00000227678 3532 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col18a1P39061 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Col18a1P39061 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm11550-201ENSMUST00000118210 699 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm14349-201ENSMUST00000137155 902 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm44259-201ENSMUST00000204996 298 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Api5-ps-201ENSMUST00000206607 577 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 Gm46369-201ENSMUST00000221577 401 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 AC154846.2-201ENSMUST00000228805 424 ntBASIC8.07□□□□□ -1.12
Col18a1P39061 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col18a1P39061 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col18a1P39061 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm37685-201ENSMUST00000193507 2177 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm13137-201ENSMUST00000118035 345 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Col18a1P39061 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.06□□□□□ -1.12
Col18a1P39061 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm29284-201ENSMUST00000188363 255 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Gm28066-201ENSMUST00000188657 472 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm37934-201ENSMUST00000192902 402 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC8.06□□□□□ -1.12
Col18a1P39061 Gm43744-201ENSMUST00000196387 688 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 AC116465.1-201ENSMUST00000220324 235 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Gm18628-201ENSMUST00000220584 475 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 AC211878.1-201ENSMUST00000221668 474 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 AC114585.1-201ENSMUST00000228080 3680 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col18a1P39061 Mir30b-201ENSMUST00000083542 96 ntBASIC8.06□□□□□ -1.12
Col18a1P39061 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col18a1P39061 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms