Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.71□□□□□ -1.34
Syne3Q4FZC9 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm16511-201ENSMUST00000120019 564 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm15502-201ENSMUST00000121449 208 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm24854-201ENSMUST00000158025 98 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm43048-201ENSMUST00000196101 388 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Diaph3-206ENSMUST00000226745 713 ntBASIC6.7□□□□□ -1.34
Syne3Q4FZC9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Syne3Q4FZC9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm12713-201ENSMUST00000118404 764 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm13924-201ENSMUST00000119899 486 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm11472-201ENSMUST00000121305 556 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm12929-201ENSMUST00000122406 370 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Mir1953-201ENSMUST00000157866 89 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm23259-201ENSMUST00000158318 303 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm23632-201ENSMUST00000175289 125 ntBASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Syne3Q4FZC9 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms