Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.15□□□□□ -1.27
Sox1P53783 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Sox1P53783 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Sox1P53783 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm12740-201ENSMUST00000118794 308 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm16463-201ENSMUST00000120527 721 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Sox1P53783 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm15502-201ENSMUST00000121449 208 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Mir1960-201ENSMUST00000157488 78 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm25603-201ENSMUST00000158361 105 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm6428-201ENSMUST00000161062 345 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Sox1P53783 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm8032-201ENSMUST00000171009 574 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm25244-201ENSMUST00000178089 132 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm9541-201ENSMUST00000188409 502 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Dalir-201ENSMUST00000188773 2170 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm20932-201ENSMUST00000189115 694 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm37203-201ENSMUST00000191618 385 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.14□□□□□ -1.27
Sox1P53783 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.14□□□□□ -1.27
Sox1P53783 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Ighv1-41-201ENSMUST00000194414 329 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm43560-201ENSMUST00000198100 773 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm42652-201ENSMUST00000199073 614 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm43841-201ENSMUST00000199491 586 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.14□□□□□ -1.27
Sox1P53783 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Sox1P53783 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm9628-201ENSMUST00000222169 725 ntBASIC7.14□□□□□ -1.27
Sox1P53783 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Sox1P53783 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.14□□□□□ -1.27
Sox1P53783 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Sox1P53783 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.14□□□□□ -1.27
Sox1P53783 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.14□□□□□ -1.27
Sox1P53783 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox1P53783 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox1P53783 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.14□□□□□ -1.27
Sox1P53783 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Sox1P53783 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Gm42614-201ENSMUST00000198724 1554 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sox1P53783 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox1P53783 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Gm42576-201ENSMUST00000202336 2846 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.13□□□□□ -1.27
Sox1P53783 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox1P53783 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms