Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm8454-201ENSMUST00000196980 811 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm5853-201ENSMUST00000197183 632 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.86□□□□□ -1.47
Sox3P53784 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm44243-201ENSMUST00000204323 692 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm17997-201ENSMUST00000211801 840 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.86□□□□□ -1.47
Sox3P53784 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.86□□□□□ -1.47
Sox3P53784 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.86□□□□□ -1.47
Sox3P53784 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Sox3P53784 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Sox3P53784 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.86□□□□□ -1.47
Sox3P53784 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sox3P53784 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Sox3P53784 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox3P53784 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm14870-201ENSMUST00000118414 156 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm3715-201ENSMUST00000172308 617 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Gm24957-201ENSMUST00000179604 132 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm5334-201ENSMUST00000187472 720 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Gm38291-201ENSMUST00000193671 259 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm7802-201ENSMUST00000216464 262 ntBASIC5.85□□□□□ -1.47
Sox3P53784 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.85□□□□□ -1.47
Sox3P53784 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.85□□□□□ -1.47
Sox3P53784 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.85□□□□□ -1.47
Sox3P53784 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox3P53784 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Sox3P53784 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sox3P53784 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox3P53784 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.85□□□□□ -1.47
Sox3P53784 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox3P53784 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox3P53784 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox3P53784 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox3P53784 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox3P53784 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Sox3P53784 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox3P53784 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox3P53784 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox3P53784 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox3P53784 Gm24230-201ENSMUST00000104313 129 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox3P53784 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox3P53784 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox3P53784 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Gm13579-201ENSMUST00000118519 517 ntBASIC5.84□□□□□ -1.47
Sox3P53784 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms