Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm9987-201ENSMUST00000069768 567 ntBASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1h3Q9Z0Y9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1h3Q9Z0Y9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm18025-201ENSMUST00000221733 862 ntBASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1h3Q9Z0Y9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1h3Q9Z0Y9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1h3Q9Z0Y9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm6433-201ENSMUST00000118634 875 ntBASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm42545-201ENSMUST00000202755 922 ntBASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1h3Q9Z0Y9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms