Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col13a1Q9R1N9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col13a1Q9R1N9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col13a1Q9R1N9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col13a1Q9R1N9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col13a1Q9R1N9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Mtag2-201ENSMUST00000058665 714 ntBASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col13a1Q9R1N9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Gm9103-201ENSMUST00000119371 405 ntBASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Flg-201ENSMUST00000050758 1488 ntBASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.25■□□□□ 0.03
Col13a1Q9R1N9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Golph3-205ENSMUST00000228671 2842 ntBASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Col13a1Q9R1N9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col13a1Q9R1N9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col13a1Q9R1N9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms