Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim39Q9ESN2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Gm42642-201ENSMUST00000200683 355 ntBASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim39Q9ESN2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Gm10033-202ENSMUST00000211874 928 ntBASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim39Q9ESN2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim39Q9ESN2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim39Q9ESN2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim39Q9ESN2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Gm13534-201ENSMUST00000121169 513 ntBASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim39Q9ESN2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Trim39Q9ESN2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms