Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4bQ9ES00 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4bQ9ES00 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ube4bQ9ES00 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ube4bQ9ES00 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.27■□□□□ 0.36
Ube4bQ9ES00 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ube4bQ9ES00 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Haglr-201ENSMUST00000100000 2085 ntBASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ube4bQ9ES00 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube4bQ9ES00 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ube4bQ9ES00 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube4bQ9ES00 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms