Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.41
Rsph9Q9D9V4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Gm38285-201ENSMUST00000192928 922 ntBASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Mtag2-201ENSMUST00000058665 714 ntBASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph9Q9D9V4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rsph9Q9D9V4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Mir1199-201ENSMUST00000117015 119 ntBASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Gm10138-203ENSMUST00000206952 366 ntBASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph9Q9D9V4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Gm715-201ENSMUST00000117865 831 ntBASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph9Q9D9V4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rsph9Q9D9V4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rsph9Q9D9V4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rsph9Q9D9V4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rsph9Q9D9V4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rsph9Q9D9V4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rsph9Q9D9V4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms