Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.94■□□□□ 0.3
Chaf1bQ9D0N7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1bQ9D0N7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Gm38205-201ENSMUST00000192243 258 ntBASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1bQ9D0N7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1bQ9D0N7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chaf1bQ9D0N7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms