Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim13Q9CYB0 Fst-202ENSMUST00000223640 2612 ntBASIC16.66■□□□□ 0.26
Trim13Q9CYB0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim13Q9CYB0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim13Q9CYB0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim13Q9CYB0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim13Q9CYB0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim13Q9CYB0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Gm27454-201ENSMUST00000185090 204 ntBASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim13Q9CYB0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim13Q9CYB0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms