Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsm7Q9CQQ8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsm7Q9CQQ8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsm7Q9CQQ8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Mir6982-201ENSMUST00000184354 68 ntBASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsm7Q9CQQ8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm7Q9CQQ8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm7Q9CQQ8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms