Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.55■□□□□ 0.4
Msh4Q99MT2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Msh4Q99MT2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.54■□□□□ 0.4
Msh4Q99MT2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh4Q99MT2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm26524-201ENSMUST00000192339 390 ntBASIC17.53■□□□□ 0.4
Msh4Q99MT2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.53■□□□□ 0.4
Msh4Q99MT2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Msh4Q99MT2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.52■□□□□ 0.4
Msh4Q99MT2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh4Q99MT2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Msh4Q99MT2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.52■□□□□ 0.39
Msh4Q99MT2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Msh4Q99MT2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Msh4Q99MT2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Msh4Q99MT2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Msh4Q99MT2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.5■□□□□ 0.39
Msh4Q99MT2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.5■□□□□ 0.39
Msh4Q99MT2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.5■□□□□ 0.39
Msh4Q99MT2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Msh4Q99MT2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.49■□□□□ 0.39
Msh4Q99MT2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.49■□□□□ 0.39
Msh4Q99MT2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms