Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ndc1Q8VCB1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Gm10698-201ENSMUST00000182663 604 ntBASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ndc1Q8VCB1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.96■□□□□ 0.31
Ndc1Q8VCB1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc1Q8VCB1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc1Q8VCB1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ndc1Q8VCB1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ndc1Q8VCB1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Gm15378-201ENSMUST00000121894 207 ntBASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Gm6576-201ENSMUST00000169678 883 ntBASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Mir6982-201ENSMUST00000184354 68 ntBASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ndc1Q8VCB1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ndc1Q8VCB1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ndc1Q8VCB1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms