Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chrna3Q8R4G9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Chrna3Q8R4G9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chrna3Q8R4G9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Chrna3Q8R4G9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chrna3Q8R4G9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chrna3Q8R4G9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chrna3Q8R4G9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chrna3Q8R4G9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chrna3Q8R4G9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chrna3Q8R4G9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chrna3Q8R4G9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms