Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cd109Q8R422 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cd109Q8R422 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cd109Q8R422 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cd109Q8R422 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Cd109Q8R422 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC25.64■■□□□ 1.7
Cd109Q8R422 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC25.64■■□□□ 1.7
Cd109Q8R422 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cd109Q8R422 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cd109Q8R422 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cd109Q8R422 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cd109Q8R422 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cd109Q8R422 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cd109Q8R422 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Gm45058-201ENSMUST00000205810 766 ntBASIC25.63■■□□□ 1.69
Cd109Q8R422 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC25.63■■□□□ 1.69
Cd109Q8R422 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Cd109Q8R422 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cd109Q8R422 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cd109Q8R422 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cd109Q8R422 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC25.61■■□□□ 1.69
Cd109Q8R422 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cd109Q8R422 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Cd109Q8R422 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cd109Q8R422 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cd109Q8R422 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cd109Q8R422 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cd109Q8R422 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Cd109Q8R422 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Cd109Q8R422 Notumos-201ENSMUST00000151998 2659 ntBASIC25.59■■□□□ 1.69
Cd109Q8R422 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Cd109Q8R422 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC25.59■■□□□ 1.69
Cd109Q8R422 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
Cd109Q8R422 Gm9694-201ENSMUST00000193347 1189 ntBASIC25.59■■□□□ 1.69
Cd109Q8R422 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cd109Q8R422 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cd109Q8R422 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
Cd109Q8R422 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cd109Q8R422 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Cd109Q8R422 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Cd109Q8R422 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC25.58■■□□□ 1.69
Cd109Q8R422 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC25.58■■□□□ 1.69
Cd109Q8R422 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC25.57■■□□□ 1.68
Cd109Q8R422 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cd109Q8R422 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Gm10418-201ENSMUST00000100943 576 ntBASIC25.57■■□□□ 1.68
Cd109Q8R422 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Gm4217-201ENSMUST00000182243 1002 ntBASIC25.57■■□□□ 1.68
Cd109Q8R422 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cd109Q8R422 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Cd109Q8R422 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC25.56■■□□□ 1.68
Cd109Q8R422 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Cd109Q8R422 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cd109Q8R422 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Cd109Q8R422 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC25.55■■□□□ 1.68
Cd109Q8R422 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cd109Q8R422 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC25.54■■□□□ 1.68
Cd109Q8R422 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC25.54■■□□□ 1.68
Cd109Q8R422 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cd109Q8R422 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC25.54■■□□□ 1.68
Cd109Q8R422 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cd109Q8R422 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms