Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hbp1Q8R316 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Hbp1Q8R316 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Mir7071-201ENSMUST00000184847 69 ntBASIC17.79■□□□□ 0.44
Hbp1Q8R316 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.79■□□□□ 0.44
Hbp1Q8R316 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hbp1Q8R316 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Gm37292-201ENSMUST00000192062 758 ntBASIC17.78■□□□□ 0.44
Hbp1Q8R316 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.78■□□□□ 0.44
Hbp1Q8R316 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
Hbp1Q8R316 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Gm12382-201ENSMUST00000122005 922 ntBASIC17.77■□□□□ 0.44
Hbp1Q8R316 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbp1Q8R316 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Hbp1Q8R316 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hbp1Q8R316 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
Hbp1Q8R316 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Gm37055-201ENSMUST00000191866 133 ntBASIC17.76■□□□□ 0.43
Hbp1Q8R316 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbp1Q8R316 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Mir5122-201ENSMUST00000175004 89 ntBASIC17.75■□□□□ 0.43
Hbp1Q8R316 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.75■□□□□ 0.43
Hbp1Q8R316 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbp1Q8R316 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.74■□□□□ 0.43
Hbp1Q8R316 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms