Protein–RNA interactions for Protein: Q8CDT9

4933402N03Rik, MCG1612, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933402N03RikQ8CDT9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
4933402N03RikQ8CDT9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
4933402N03RikQ8CDT9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.18■□□□□ 0.18
4933402N03RikQ8CDT9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 AV356131-201ENSMUST00000206201 750 ntBASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
4933402N03RikQ8CDT9 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
4933402N03RikQ8CDT9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
4933402N03RikQ8CDT9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
4933402N03RikQ8CDT9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
4933402N03RikQ8CDT9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.14■□□□□ 0.17
4933402N03RikQ8CDT9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
4933402N03RikQ8CDT9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
4933402N03RikQ8CDT9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
4933402N03RikQ8CDT9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms