Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps53Q8CCB4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Vps53Q8CCB4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps53Q8CCB4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Vps53Q8CCB4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps53Q8CCB4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Vps53Q8CCB4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Vps53Q8CCB4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vps53Q8CCB4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps53Q8CCB4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Gm12896-201ENSMUST00000118430 226 ntBASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Gm27275-201ENSMUST00000184318 272 ntBASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps53Q8CCB4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps53Q8CCB4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps53Q8CCB4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps53Q8CCB4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Vps53Q8CCB4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms